"Gene 1","Gene 2",SNP_id,Allele,Chromosome_no,Chr_position,Functional_class,P-value,Odds_ratio,PMID "7 kb upstream",,rs9942471,A>C,6,89238513?(G,None,"2.1 X 10-7",1.24,29703844, ADAMTS9,,rs4607103,C,3,64726228,intron,0.00000001,1.09,18372903, ANXA5,TMEM155,rs7659604,T,4,121744359,--,0.000009,1.35,17554300, BCL11A,,rs243021,A,2,60357684,--,3.00E-15,1.08,20581827, CACNA1E,,rs679931,TT,1,181514928,intron-variant,0.06,1.4,17934712, CCND2,,rs76895963,G,12,4275678,intron-variant,4.40E-10,0.55,24464100,Expression CCND2,,rs75615236,G,12,4196806,--,7.90E-05,1.15,24464100,Expression CD96,,rs1282090,A/G,3,111578267,intron-variant,0.0004,1.58,17846126, CDC123,CAMK1D,rs12779790,G,10,12286011,--,1.00E-10,1.11,18372903, CDKAL1,,rs10946398," --",6,20660803,intron,0.0000007,1.18,19056611, CDKAL1,,rs10946398,C,6,20661034,intron-variant,4.10E-04,1.12,20424228, CDKAL1,,rs10440833,A,6,20687890,intron,2.00E-22,1.25,20581827, CDKAL1,,rs6931514,G,6,20703721,intron,1.00E-11,1.25,18372903, CDKAL1,,rs9465871,C,6,20717024,intron,0.0000003,1.18,17554300, CDKAL1,,rs7754840,C,6,20661019,intron,4.00E-11,1.12,17463246, CDKAL1,,rs7756992,G,6,20679478,intron,0.000000008,1.2,17460697, CDKAL1,,rs10946398,C,6,20660803,intron,0.00000001,1.16,17463249, CDKN2A,CDKN2B,rs10811661,T,9,22134095,--,0.000005,1.19,17463249, CDKN2A,CDKN2B,rs564398,T,9,22029548,ncRNA,0.000001,1.13,17463249, CDKN2A,CDKN2B,rs10965250,G,9,22133285,--,1.00E-10,1.2,20581827, CDKN2A,CDKN2B,rs7020996,C,9,22129580,--,0.0000002,1.26,18372903, CDKN2A,CDKN2B,rs10811661,T,9,22134095,--,0.00000005,1.2,17463246, CDKN2B,,rs10811661," --",9,22134095,--,0.0000007,1.26,19056611,Expression CENTD2,,rs1552224,A,11,72722053,intron,1.00E-22,1.14,20581827,Expression CHCHD9,,rs13292136,C,9,79337213,--,0.00000003,1.11,20581827,Expression COL13A1,,rs4082516,C/G,10,69944900,intron-variant,3.19E-05,0.53,17846126,Expression DCD,,rs1153188,A,12,54705212,--,0.0000002,1.08,18372903, DUSP9,,rs5945326,A,23,153634467,--,3.00E-10,1.27,20581827, FBXL17,,rs723397,C/T,5,108012342,intron-variant,0.0003,0.65,17846126, FLJ34870,,rs9287428,C/T,2,133438497,intron-variant,0.0002,1.62,17846126, FLJ34870,,rs7604549,A/G,2,133449192,intron-variant,0.0002,0.65,17846126, FTO,,rs1421085,C,16,53800954,intron-variant,0.02,--,19255736,Expression FTO,,rs11642841,A,16,53811575,intron,0.00000003,1.13,20581827,Expression FTO,,rs8050136," --",16,53782363,intron,2.00E-17,1.3,19056611,Expression FTO,,rs8050136,A,16,53782363,intron,0.000007,1.15,18372903,Expression FTO,,rs9939609,A,16,53786615,intron,0.0000002,1.34,17554300,Expression FTO,,rs8050136,A,16,53782363,intron,7.00E-14,1.23,17463249,Expression GFM1,,rs1492908,A/G,3,158668718,intron-variant,0.0002,0.62,17846126,Expression GFM1,,rs1367313,C/T,3,158647749,intron-variant,0.0003,1.57,17846126, Grb10,,rs2237457,A/G,7,50658447,intron-variant,1.07E-05,0.61,17846126, HHEX,,rs1111875,G/A,10,94462882,--,5.70E-10,1.13,20424228,Expression HHEX,,rs5015480,C,10,92705802,--,0.00000007,1.17,18372903,Expression HHEX,,rs1111875,C,10,92703125,--,6.00E-10,1.13,17463246,Expression HHEX,,rs5015480,C,10,92705802,--,0.000005,1.13,17463249,Expression HHEX,,rs1111875,G,10,92703125,,0.000003,1.19,17293876,Expression HHEX,IDE,rs5015480,C,10,92705802,--,1.00E-15,1.18,20581827,Expression HIGD1C,,rs12304921,G,12,50963759,intron,0.000007,2.5,17554300, HMGA2,,rs1531343,C,12,65781114,intron,0.000000004,1.1,20581827, HNF1A,,rs7957197,T,12,121022883,intron,0.00000002,1.07,20581827, HNF1B,TCF2,rs4430796,G,17,37738049,intron,0.000002,1.14,20581827, IGF2BP2,,rs1470579,C,3,185811292,intron,0.000000002,1.14,20581827,Expression IGF2BP2,,rs4402960,T,3,185793899,intron,0.00000008,1.17,18372903,Expression IGF2BP2,,rs4402960,T,3,185793899,intron,0.000000002,1.17,17463246,Expression IGF2BP2,,rs4402960,T,3,185793899,intron,9.00E-16,1.14,17463249,Expression IGF2BP2,,rs4402960,T/G,3,185511687,intron-variant,--,--,20424228, IL10,,rs1800896,"1082 A>G",,,,,,27114918, IRS1,,rs7578326,A,2,226155937,intron,5.00E-20,1.11,20581827, JAZF1,,rs864745,A,7,28140937,intron-variant,0.03,1.08,19020324, JAZF1,,rs849134,A,7,28156603,intron,0.000000003,1.13,20581827, JAZF1,,rs864745,T,7,28140937,intron,5.00E-14,1.1,18372903, KCNJ11,,rs5219,T>C,11,17409572,"intron-variant,missense,reference",6.70E-04,1.14,20424228, KCNJ11,,rs5219," --",11,17388025,missense,0.0000005,1.19,19056611, KCNJ11,,rs5215,C,11,17387083,missense,0.0000004,1.16,18372903, KCNJ11,,rs5219,T,11,17388025,missense,0.0000001,1.15,17463246, KCNJ11,,rs5215,C,11,17387083,missense,5.00E-11,1.14,17463249, KCNQ1,,rs231362,G,11,2670241,intron;ncRNA,3.00E-13,1.08,20581827, KIAA0672,,rs10521205,"A/G ",17,12965825,intron-variant,0.0003,0.6,17846126, KIAA0672,,rs10521204,A/C,17,12965343,intron-variant,0.0003,1.65,17846126, KIAA1604,,rs10497567,A/G,1,180538737,,0.0004,1.98,17846126, KLF10,," -","3' UTR +10",8,,--,0.009,0.81,17931948, KLF14,,rs972283,G,7,130782095,--,2.00E-10,1.07,20581827, LOC646736,,rs7578326,A>G,2,226155937?(,"LOC646736 : Intron Variant",NA,NA,30888963, LRTM1,WNT5A,rs358806," --",3,55279372,--,0.000003,1.16,17554300, MC4R,,rs17782313,C,18,57851097,--,0.02,--,19255736, MSH6,,rs3136279,G/T,2,47790629,intron-variant,6.81E-05,1.8,17846126,Expression MTHFSD,,rs3751797,A/T,16,86533886,intron-variant,8.74E-05,1.6,17846126, MTNR1B,,rs1387153,T,11,92940662,--,8.00E-15,1.09,20581827, NOTCH2,,rs10923931,T,1,119975336,intron-variant,0.02,1.13,19020324, NOTCH2,ADAM30,rs10923931,T,1,119975336,intron,0.00000004,1.13,18372903, NPY2R,,--,--,4,--,--,1.73E-04,--,17325259,Expression PAM,,rs35658696,G,5,103003107,"missense,nc-transcript-variant,reference",5.30E-06,1.21,24464100,Expression PAM,,rs78408340,G,5,103003035,"missense,nc-transcript-variant,reference",0.001,1.42,24464100,Expression PPARG,,rs1801282,C/G,3,12393125,"intron-variant,missense,reference",1.70E-06,1.14,20424228,Expression PPARG,,rs13081389,A,3,12248301,--,0.0000002,1.24,20581827,Expression PPARG,,rs1801282,C,3,12351626,missense,0.000002,1.14,17463246,Expression PPARG,,rs1801282,C,3,12351626,missense,0.000002,1.14,17463249,Expression PRC1,,rs8042680,A,15,90978107,intron;intron,2.00E-10,1.07,20581827, PRKG2,,rs980720,A/G,4,81131909,intron-variant,1.25E-05,0.52,17846126, RBMS1,ITGB6,rs7593730," --",2,160314943,--,0.00000004,0.9,20418489, RIMS1,,rs10498881,C/G,6,72232903,intron-variant,0.0002,0.48,17846126, SAMD12,,rs7817780,C/T,8,118404727,intron-variant,0.0002,1.85,17846126, SIRT1,,"rs1513287 ",A/G,3,113553361,intron-variant,0.0002,1.49,17846126, SLC30A8,,rs13266634,C/T,8,118184783,"missense,reference",5.30E-08,1.12,20424228, SLC30A8,,rs3802177,G,8,117172786,UTR-3,0.00000001,1.15,20581827, SLC30A8,,rs13266634," --",8,117172544,missense,0.000007,1.18,19056611, SLC30A8,,rs13266634,C,8,117172544,missense,0.00000005,1.12,17463246, SLC30A8,,rs13266634,C,8,117172544,missense,0.000003,1.15,17460697, SLC30A8,,rs13266634,C,8,117172544,missense,0.00000005,1.12,17463249, SLC30A8,,rs13266634,C,8,117172544,missense,0.00000006,1.18,17293876,Expression SMAD7,," -",-,18,,--,0.007,0.62,17931948, SPECC1,,rs1373147,A/T,17,20303332,intron-variant,2.79E-05,0.63,17846126, SPECC1,,rs2703813,A/G,17,20212002,intron-variant,8.12E-05,0.64,17846126, SPECC1,,"rs2158473 ",C/T,17,20235777,intron-variant,0.0001,1.54,17846126, SYN2,PPARG,rs17036101,G,3,12236345,--,0.0000002,1.15,18372903,Expression TCEB1,,rs10504553,A/G,8,73964168,intron-variant,0.0002,0.56,17846126,Expression TCF7L2,,rs7903146,T/C,10,114758349,intron-variant,1.00E-48,1.37,20424228,Expression TCF7L2,,rs7903146,T,10,112998590,intron,2.00E-51,1.4,20581827,Expression TCF7L2,,rs7903146," --",10,112998590,intron,6.00E-16,1.31,19056611,Expression TCF7L2,,rs7903146,T,10,112998590,intron,3.00E-23,1.37,18372903,Expression TCF7L2,,rs4506565,T,10,112996282,intron,5.00E-12,1.36,17554300,Expression TCF7L2,,rs7903146,T,10,112998590,intron,2.00E-31,1.38,17463246,Expression TCF7L2,,rs7903146," --",10,112998590,intron,2.00E-10,1.38,17460697,Expression TCF7L2,,rs7901695,C,10,112994329,intron,1.00E-48,1.37,17463249,Expression TCF7L2,,rs7903146,T,10,112998590,intron,2.00E-34,1.65,17293876,Expression THADA,,rs7578597,T,2,43505684,missense,0.000000001,1.15,18372903, TP53,,rs1042522,G,17,7579472,"missense,reference,upstream-variant-2KB",0.0032,1.06,21283750,Expression TP53INP1,,rs896854,T,8,94948283,intron;nearGene-5,0.000000001,1.06,20581827, TRPS1,,rs2737245,A/C,8,115646356,intron-variant,0.0002,0.67,17846126, TSPAN8,LGRF,rs1495377,G,12,71183321,--,0.000007,1.28,17554300, TSPAN8,LGRF,rs4760790,A,12,71241014,--,0.000004,1.11,20581827, TSPAN8,LGRF,rs7961581,C,12,71269322,--,0.000000001,1.09,18372903, VEGFA,,rs9472138,T,6,43844025,--,0.000004,1.06,18372903, WFS1,,rs10010131,G,4,6291188,intron-variant,0.001,1.12,19020324, WFS1,,rs1801214,T,4,6301295,missense,0.00000003,1.13,20581827,Expression ZBED3,,rs4457053,G,5,77129124,intron,3.00E-12,1.08,20581827, ZFAND6,,rs11634397,G,15,80139880,--,0.000000002,1.06,20581827, ,,rs10509199,G/T,10,63866054,intron-variant,1.68E-05,0.62,17846126, ,,rs10509195,A/C,10,63763606,--,3.30E-05,1.62,17846126, ,,"rs1395931 ",A/G,2,123061397,--,6.36E-05,1.57,17846126, ,,"rs1446732 ",G/T,2,133900169,--,7.38E-05,1.55,17846126, ,,rs10485249,C/G,6,69395295,--,7.96E-05,0.54,17846126, ,,rs1916412,C/T,10,63911035,--,8.35E-05,1.54,17846126, ,,rs1916411,C/G,10,63911073,--,8.48E-05,0.65,17846126, ,,rs930621,C/T,2,133944507,--,8.74E-05,1.55,17846126, ,,rs10509201,A/G,10,63912482,--,8.80E-05,1.53,17846126, ,,rs2502497,G/T,6,74632647,intron-variant,0.0001,0.43,17846126, ,,rs430123,A/G,5,106746032,--,0.0002,0.61,17846126, ,,rs10507601,A/G,13,55575243,--,0.0002,0.44,17846126, ,,rs994952,A/G,6,77553238,--,0.0002,1.52,17846126, ,,rs297765,A/G,20,4506463,--,0.0002,1.55,17846126, ,,rs4410442,A/G,3,111232963,--,0.0002,1.52,17846126, ,,rs1351916,A/T,2,139005878,--,0.0002,0.67,17846126, ,,rs1507666,A/T,2,123058409,--,0.0002,0.66,17846126, ,,rs10498934,C/T,6,82750130,--,0.0002,0.66,17846126, ,,rs721729,A/G,3,173471483,intron-variant,0.0002,0.65,17846126, ,,rs10484725,A/G,6,77559444,--,0.0002,1.75,17846126, ,,rs10487440,"G/T ",7,126336506,--,0.0002,0.59,17846126, ,,rs9317821,C/T,13,69536272,--,0.0002,0.67,17846126, ,,rs10487442,A/G,7,126423202,--,0.0003,1.68,17846126, ,,"rs6897150 ",A/G,5,166473793,--,0.0003,1.6,17846126, ,,rs1458405,G/T,6,77554762,--,0.0003,1.54,17846126, ,,rs1023738,C/T,3,173485440,intron-variant,0.0003,0.67,17846126, ,,rs2034531,A/G,4,136223455,--,0.0003,0.59,17846126, ,,rs9328099,A/G,6,2437311,--,0.0004,0.63,17846126,